crash in ResegmentMerge after upgrade to 9.2

Forum|Forum|7 years ago
June 5, 2019
19 replies
12 views

phil2
Participating Frequently

Hello!

I'm facing SIGSEGV on some queries after an upgrade from 8.1.1-4 to 9.2.0-7

Queries:

select * 
from( 
    select lu.AdmUser_id, ia.IsActual, l.AdmUserGroupLink_id, 
        min(ia.Actual_date) over(partition by ia.AdmUserGroupLink_id) as valid_from ,
        lead(ia.Actual_date, 1, null) over(partition by ia.AdmUserGroupLink_id order by ia.Actual_date) as valid_to 
    from DDS.H_AdmUserGroupLink l 
    join DDS.L_AdmUserGroupLink_AdmUser lu on lu.AdmUserGroupLink_id = l.AdmUserGroupLink_id 
    join DDS.S_AdmUserGroupLink_IsActual ia on ia.AdmUserGroupLink_id = l.AdmUserGroupLink_id 
)t 
where admuser_Id = 124954500001 
limit 50;

select *, lu.AdmUser_id, ia.IsActual, 
    row_number() over(partition by l.AdmUserGroupLink_id) rn, 
    lead(lu.AdmUser_id) over(partition by l.AdmUserGroupLink_id order by true) valid_to
from DDS.H_AdmUserGroupLink l join DDS.L_AdmUserGroupLink_AdmUser lu on lu.AdmUserGroupLink_id = l.AdmUserGroupLink_id 
join DDS.S_AdmUserGroupLink_IsActual ia on ia.AdmUserGroupLink_id = l.AdmUserGroupLink_id 
where ia.IsActual is not null 
order by lu.AdmUser_id desc 
limit 100;

DDL is in attachment

I have already recreated and refilled these tables and it did not help.
Each time I run it I get SIGSEGV on every vertica node.
Backtrace is in attachments.
Looks like the problem within StorageMerge in a ResegmentMerge::performResegmen call:

(_ZN2EE14ResegmentMerge16performResegmentEPNS_11MergeBufferEiiRNS_14TupleStructureERSt6vectorIPNS_13SegTempBufferESaIS7_EEiiPNS_5VEvalERNS_11VEvalParamsE+0x551) [0x130fa81]

Can you help me with fixing this?

Vertiguy
Participating Frequently
Forum|Forum|7 years ago
June 5, 2019

What was your upgrade path?

phil2
Author
Participating Frequently
Forum|Forum|7 years ago
June 5, 2019

vertica_8.1.1-4_amd64.deb (initial)
vertica_9.0.1-20_amd64.deb
vertica_9.1.1-8_amd64.deb
vertica_9.2.0-7_amd64.deb

Jim_Knicely
Participating Frequently
Forum|Forum|7 years ago
June 5, 2019

@phil2 - Are you running on Debian Linux Versions 8.5 or 8.9?

I tried your examples on Vertica 9.2.1-1 on RHEL and did not have an issue. Althouogh, I did not have any data.

phil2
Author
Participating Frequently
Forum|Forum|7 years ago
June 5, 2019

cat /etc/debian_version
8.6
uname -a
Linux avi-dwh15 3.16.0-4-amd64 #1 SMP Debian 3.16.36-1+deb8u1 (2016-09-03) x86_64 GNU/Linux

LenoyJ
Participating Frequently
Forum|Forum|7 years ago
June 5, 2019

Just checking if you started up the DB after every package install?

Jim_Knicely
Participating Frequently
Forum|Forum|7 years ago
June 5, 2019

@phil2 - You are running Vertica 9.2.0-7 on an unsupported version of Debian Linux.

See:
https://www.vertica.com/docs/9.2.x/HTML/Content/Authoring/SupportedPlatforms/MCandServer.htm

phil2
Author
Participating Frequently
Forum|Forum|7 years ago
June 6, 2019

@LenoyJ Yes, I did start the DB after each upgrade step
@Jim_Knicely So you won't help us?

phil2
Author
Participating Frequently
Forum|Forum|7 years ago
June 6, 2019

here is the data to reproduce crash

SruthiA
Participating Frequently
Forum|Forum|7 years ago
June 6, 2019

I tried without loading data on 9.2.0-7. it did not crash. I will try by using the data you provided.

dbadmin=> select version();

version

Vertica Analytic Database v9.2.0-7
(1 row)

dbadmin=>

dbadmin=> select *
dbadmin-> from(
dbadmin(> select lu.AdmUser_id, ia.IsActual, l.AdmUserGroupLink_id,
dbadmin(> min(ia.Actual_date) over(partition by ia.AdmUserGroupLink_id) as valid_from ,
dbadmin(> lead(ia.Actual_date, 1, null) over(partition by ia.AdmUserGroupLink_id order by ia.Actual_date) as valid_to
dbadmin(> from DDS.H_AdmUserGroupLink l
dbadmin(> join DDS.L_AdmUserGroupLink_AdmUser lu on lu.AdmUserGroupLink_id = l.AdmUserGroupLink_id
dbadmin(> join DDS.S_AdmUserGroupLink_IsActual ia on ia.AdmUserGroupLink_id = l.AdmUserGroupLink_id
dbadmin(> )t
dbadmin-> where admuser_Id = 124954500001
dbadmin-> limit 50;
AdmUser_id | IsActual | AdmUserGroupLink_id | valid_from | valid_to
------------+----------+---------------------+------------+----------
(0 rows)

dbadmin=>
dbadmin=> select *, lu.AdmUser_id, ia.IsActual,
dbadmin-> row_number() over(partition by l.AdmUserGroupLink_id) rn,
dbadmin-> lead(lu.AdmUser_id) over(partition by l.AdmUserGroupLink_id order by true) valid_to
dbadmin-> from DDS.H_AdmUserGroupLink l join DDS.L_AdmUserGroupLink_AdmUser lu on lu.AdmUserGroupLink_id = l.AdmUserGroupLink_id
dbadmin-> join DDS.S_AdmUserGroupLink_IsActual ia on ia.AdmUserGroupLink_id = l.AdmUserGroupLink_id
dbadmin-> where ia.IsActual is not null
dbadmin-> order by lu.AdmUser_id desc
dbadmin-> limit 100;
AdmUserGroupLink_id | External_ID | LAUNCH_ID | Source_system_id | AdmUserGroupLink_id | AdmUser_id | LAUNCH_ID | Source_system_id | AdmUserGroupLink_id | IsActual | Actual_date | Load_date | Source_system_id | LAUNCH_ID | AdmUser_id | IsActual | rn | valid_to
---------------------+-------------+-----------+------------------+---------------------+------------+-----------+------------------+---------------------+----------+-------------+-----------+------------------+-----------+------------+----------+----+----------
(0 rows)

phil2
Author
Participating Frequently
Forum|Forum|7 years ago
June 7, 2019

@SruthiA you need to remove identity column from ddl in order to load the data from csv. We managed to reproduce the crash on a newly installed single node cluster with these data running 9.2.0-7

SruthiA
Participating Frequently
Forum|Forum|7 years ago
June 7, 2019

Hi Phil,

Yes, I removed it. So far loaded data into H_AdmUserGroupLink. Can you share me the count of rows for each table. Does count of rows matter?

Sruthi

Jim_Knicely
Participating Frequently
Forum|Forum|7 years ago
June 7, 2019

Just tested in Vertica 9.2.1-1 and the second query causes a DB crash!

dbadmin=> SELECT COUNT(*) FROM dds.H_AdmUserGroupLink;
 COUNT
-------
  7676
(1 row)

dbadmin=> SELECT COUNT(*) FROM dds.L_AdmUserGroupLink_AdmUser;
 COUNT
-------
  7676
(1 row)

dbadmin=> SELECT COUNT(*) FROM dds.S_AdmUserGroupLink_IsActual;
 COUNT
-------
 24407
(1 row)

dbadmin=> select *
dbadmin-> from(
dbadmin(>     select lu.AdmUser_id, ia.IsActual, l.AdmUserGroupLink_id,
dbadmin(>         min(ia.Actual_date) over(partition by ia.AdmUserGroupLink_id) as valid_from ,
dbadmin(>         lead(ia.Actual_date, 1, null) over(partition by ia.AdmUserGroupLink_id order by ia.Actual_date) as valid_to
dbadmin(>     from DDS.H_AdmUserGroupLink l
dbadmin(>     join DDS.L_AdmUserGroupLink_AdmUser lu on lu.AdmUserGroupLink_id = l.AdmUserGroupLink_id
dbadmin(>     join DDS.S_AdmUserGroupLink_IsActual ia on ia.AdmUserGroupLink_id = l.AdmUserGroupLink_id
dbadmin(> )t
dbadmin-> where admuser_Id = 124954500001
dbadmin-> limit 50;
  AdmUser_id  | IsActual | AdmUserGroupLink_id |         valid_from         | valid_to
--------------+----------+---------------------+----------------------------+----------
 124954500001 | t        |         23409000001 | 2019-04-04 02:03:28.320633 |
(1 row)

dbadmin=> select *, lu.AdmUser_id, ia.IsActual,
dbadmin->     row_number() over(partition by l.AdmUserGroupLink_id) rn,
dbadmin->     lead(lu.AdmUser_id) over(partition by l.AdmUserGroupLink_id order by true) valid_to
dbadmin-> from DDS.H_AdmUserGroupLink l join DDS.L_AdmUserGroupLink_AdmUser lu on lu.AdmUserGroupLink_id = l.AdmUserGroupLink_id
dbadmin-> join DDS.S_AdmUserGroupLink_IsActual ia on ia.AdmUserGroupLink_id = l.AdmUserGroupLink_id
dbadmin-> where ia.IsActual is not null
dbadmin-> order by lu.AdmUser_id desc
dbadmin-> limit 100;
server closed the connection unexpectedly
        This probably means the server terminated abnormally
        before or while processing the request.
The connection to the server was lost. Attempting reset: Failed.
!>

@phil2 - Are you a client? Can you open a case? I will open a JIRA.

SruthiA
Participating Frequently
Forum|Forum|7 years ago
June 7, 2019

Hi Jim,

There is a support case for this issue logged by client today SD02484487

Sruthi

phil2
Author
Participating Frequently
Forum|Forum|7 years ago
June 8, 2019

Yeap, It was me

phil2
Author
Participating Frequently
Forum|Forum|7 years ago
June 11, 2019

@Jim_Knicely can you describe what you did to reproduce crash in a support ticket and open a jira issue. Nina have difficulties with reproducing it.

Jim_Knicely
Participating Frequently
Forum|Forum|7 years ago
June 11, 2019

@phil2 - I reproduced your issue by simply using your DDL and data. This issue has been identified and engineering is working on a fix. I will keep this thread open with updates!

If you email your customer SAID I can view the case and update support with the JIRA info.

My email address is james.knicely@microfocus.com

Thanks!

andrewring
New Participant
Forum|Forum|7 years ago
August 16, 2019

Hi Jim, we are also experiencing this issue. We have a ticket opened with Vertica support. Is there any ETA on a fix?

Jim_Knicely
Participating Frequently
Forum|Forum|7 years ago
August 16, 2019

Sorry, I should have updated this thread earlier! The issue was resolved in 9.2.1-4.

See:
https://www.vertica.com/docs/ReleaseNotes/9.2.x/Vertica_9.2.x_Release_Notes.htm

In particular:
Issue VER-68156 - Certain combinations of analytic functions applied to the output of a merge join would occasionally cause Vertica to crash. This issue has been fixed.

I retried the original query in this thread that caused the DB to crash, and it works fine now!

dbadmin=> SELECT version();
              version
------------------------------------
 Vertica Analytic Database v9.2.1-4
(1 row)

dbadmin=> select *, lu.AdmUser_id, ia.IsActual,
dbadmin->     row_number() over(partition by l.AdmUserGroupLink_id) rn,
dbadmin->     lead(lu.AdmUser_id) over(partition by l.AdmUserGroupLink_id order by true) valid_to
dbadmin-> from DDS.H_AdmUserGroupLink l join DDS.L_AdmUserGroupLink_AdmUser lu on lu.AdmUserGroupLink_id = l.AdmUserGroupLink_id
dbadmin-> join DDS.S_AdmUserGroupLink_IsActual ia on ia.AdmUserGroupLink_id = l.AdmUserGroupLink_id
dbadmin-> where ia.IsActual is not null
dbadmin-> order by lu.AdmUser_id desc
dbadmin-> limit 1;
 AdmUserGroupLink_id |     External_ID     | LAUNCH_ID | Source_system_id | AdmUserGroupLink_id |  AdmUser_id  | LAUNCH_ID | Source_system_id | AdmUserGroupLink_id | IsActual |        Actual_date         |         Load_date          | Source_system_id | LAUNCH_ID |  AdmUser_id  | IsActual | rn | valid_to
---------------------+---------------------+-----------+------------------+---------------------+--------------+-----------+------------------+---------------------+----------+----------------------------+----------------------------+------------------+-----------+--------------+----------+----+----------
         24429000001 | 8937546938320497366 |   3880948 |                1 |         24429000001 | 129441500001 |   3880948 |                1 |         24429000001 | t        | 2019-06-06 01:31:06.664558 | 2019-06-06 01:31:06.664558 |                1 |   3880948 | 129441500001 | t        |  1 |
(1 row)

phil2
Author
Participating Frequently
Forum|Forum|7 years ago
August 21, 2019

Thank you

version

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