+1Hello,
I installed Vertica using vertica-8.1.0-1.x86_64.RHEL6.rpm and need the vertica-R-lang-8.1.0-1.x86_64.RHEL6.rpm
Where can I download older versions of R Language Pack from? The download page only allows me to download the latest edition ( vertica-R-lang-8.1.1-0.x86_64.RHEL6.rpm )
Regards,
Vikram
+2I don't think there is a vertica-R-lang-8.1.0-1.x86_64.RHEL6.rpm version. There is an vertica-R-lang-8.1.0-0.x86_64.RHEL6.rpm release. I have the 8.1.0-0 RPM if you need it.
+1Hello Jim, yes please - where can I download it from?
+2Email me: james.knicely@hpe.com. I will send you a link.
+1Unable to install the R pack. Get the following error:
[root@sps ~]# rpm -Uvh vertica-R-lang-8.1.0-0.x86_64.RHEL6.rpm
error: Failed dependencies:
libgfortran > 4.1.2 is needed by vertica-R-lang-8.1.0-0.x86_64
[root@sps ~]# rpm -qa|grep libgfortran
compat-libgfortran-41-4.1.2-44.el7.x86_64
[root@sps ~]#
+1Resolved. Here are the steps:
[root@sps ~]# yum install gcc-gfortran Loaded plugins: product-id, search-disabled-repos, subscription-manager This system is not registered to Red Hat Subscription Management. You can use subscription-manager to register. Repository updates is listed more than once in the configuration Running transaction Installing : mpfr-3.1.1-4.el7.x86_64 1/11 Installing : libmpc-1.0.1-3.el7.x86_64 2/11 Installing : libquadmath-4.8.5-11.el7.x86_64 3/11 Installing : libgfortran-4.8.5-11.el7.x86_64 4/11 Installing : cpp-4.8.5-11.el7.x86_64 5/11 Installing : kernel-headers-3.10.0-514.el7.x86_64 6/11 Installing : glibc-headers-2.17-157.el7.x86_64 7/11 Installing : glibc-devel-2.17-157.el7.x86_64 8/11 Installing : gcc-4.8.5-11.el7.x86_64 9/11 Installing : libquadmath-devel-4.8.5-11.el7.x86_64 10/11 Installing : gcc-gfortran-4.8.5-11.el7.x86_64 11/11 Verifying : glibc-devel-2.17-157.el7.x86_64 1/11 Verifying : gcc-4.8.5-11.el7.x86_64 2/11 Verifying : kernel-headers-3.10.0-514.el7.x86_64 3/11 Verifying : gcc-gfortran-4.8.5-11.el7.x86_64 4/11 Verifying : libquadmath-4.8.5-11.el7.x86_64 5/11 Verifying : mpfr-3.1.1-4.el7.x86_64 6/11 Verifying : libgfortran-4.8.5-11.el7.x86_64 7/11 Verifying : libmpc-1.0.1-3.el7.x86_64 8/11 Verifying : libquadmath-devel-4.8.5-11.el7.x86_64 9/11 Verifying : glibc-headers-2.17-157.el7.x86_64 10/11 Verifying : cpp-4.8.5-11.el7.x86_64 11/11 Installed: gcc-gfortran.x86_64 0:4.8.5-11.el7 Dependency Installed: cpp.x86_64 0:4.8.5-11.el7 gcc.x86_64 0:4.8.5-11.el7 glibc-devel.x86_64 0:2.17-157.el7 glibc-headers.x86_64 0:2.17-157.el7 kernel-headers.x86_64 0:3.10.0-514.el7 libgfortran.x86_64 0:4.8.5-11.el7 libmpc.x86_64 0:1.0.1-3.el7 libquadmath.x86_64 0:4.8.5-11.el7 libquadmath-devel.x86_64 0:4.8.5-11.el7 mpfr.x86_64 0:3.1.1-4.el7 Complete! [root@sps ~]# [root@sps ~]# rpm -Uvh vertica-R-lang-8.1.0-0.x86_64.RHEL6.rpm Preparing... ################################# [100%] Updating / installing... 1:vertica-R-lang-8.1.0-0 ################################# [100%] The Vertica R language package has been successfully installed on host sps [root@sps ~]#
+1Noticed that it installs R version 3.2.5 (2016-04-14) -- "Very, Very Secure Dishes". We wanted to develop some R code using 'proxy’ and ‘arules’ packages; however, these packages require R version 3.3.2.
How do I upgrade to R version 3.3.2?
+2I wouldn't attempt to upgrade the version of R!!! Instead, install previous versions of the packages, i.e. ones that are compatible with R 3.2.5.
To do this you can use the "devtools" package to install previous versions of R packages ...
Example for installing "arules" package:
I am using CentOS.
Need some Linux stuff ... As root:
yum -y install libcurl libcurl-devel openssl-devel
In R:
> install.packages("devtools", repos='http://cran.us.r-project.org', dependencies=TRUE)
... all kinds of output ...
install_version("arules", version = "1.5-0", repos = "http://cran.us.r-project.org", dependencies=TRUE)
... all kinds of output ...
packageVersion("arules")
[1] ‘1.5.0’
+1+2The commands you are using are trying to install the latest versions of "proxy" and "arules". Yeah, the latest versions are not available for R 3.2.5. But you can install slightly older versions of "proxy" and "arules". In my previous post, I provided an example of how to install "arules 1.5.0". Note that the current release of "arules" is 1.5.2.
Here is the release archive index for "arules":
https://cran.r-project.org/src/contrib/Archive/arules/
+1Did attempt installing the older version of the packages using the command you shared earlier. However, was stuck with not having install_version
install_version("arules", version = "1.5-0", repos = "http://cran.us.r-project.org", dependencies=TRUE)
Error: could not find function "install_version"
library(devtools)
sessionInfo()
R version 3.2.5 (2016-04-14) Platform: x86_64-pc-linux-gnu (64-bit) Running under: CentOS Linux 7 (Core) locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=en_US.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] devtools_1.13.3 versions_0.3 loaded via a namespace (and not attached): [1] tools_3.2.5 withr_2.0.0 memoise_1.1.0 digest_0.6.12
packageVersion("install_version")
Error in packageVersion("install_version") :
package ‘install_version’ not found
>
+1Resolved by following these steps:
[root@sps tmp]# wget https://cran.r-project.org/src/contrib/Archive/arules/arules_1.5-0.tar.gz --2017-08-09 03:13:51-- https://cran.r-project.org/src/contrib/Archive/arules/arules_1.5-0.tar.gz Resolving cran.r-project.org (cran.r-project.org)... 137.208.57.37 Connecting to cran.r-project.org (cran.r-project.org)|137.208.57.37|:443... connected. HTTP request sent, awaiting response... 200 OK Length: 1349889 (1.3M) [application/x-gzip] Saving to: ‘arules_1.5-0.tar.gz’ 100%[=================================================================================>] 1,349,889 380KB/s in 3.5s 2017-08-09 03:13:56 (380 KB/s) - ‘arules_1.5-0.tar.gz’ saved [1349889/1349889] [root@sps tmp]# ll total 2664 -rw-r----- 1 root root 1349889 Oct 2 2016 arules_1.5-0.tar.gz -rw-r----- 1 root root 1352713 Mar 12 23:19 arules_1.5-2.tar.gz drwxr-xr-x. 2 root root 6 Aug 9 02:02 hsperfdata_root -rw------- 1 root root 0 Aug 5 15:08 rpm-tmp.TGaYrR [root@sps tmp]# R CMD INSTALL arules_1.5-0.tar.gz * installing to library ‘/opt/vertica/R/library’ * installing *source* package ‘arules’ ... ** package ‘arules’ successfully unpacked and MD5 sums checked ** libs gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c arrayIndex.c -o arrayIndex.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c bitmat.c -o bitmat.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c istree.c -o istree.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c matrix.c -o matrix.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c ptree.c -o ptree.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c rapriori.c -o rapriori.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c reclat.c -o reclat.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c similarity.c -o similarity.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c symtab.c -o symtab.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c tfscan.c -o tfscan.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c tid_count.c -o tid_count.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c tract.c -o tract.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c vecops.c -o vecops.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c warm.c -o warm.o gcc -std=gnu99 -shared -L/opt/vertica/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o arules.so arrayIndex.o bitmat.o istree.o matrix.o ptree.o rapriori.o reclat.o similarity.o symtab.o tfscan.o tid_count.o tract.o vecops.o warm.o -L/opt/vertica/R/lib -lR installing to /opt/vertica/R/library/arules/libs ** R ** data ** inst ** preparing package for lazy loading Creating a new generic function for ‘abbreviate’ in package ‘arules’ Creating a new generic function for ‘write’ in package ‘arules’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (arules) [root@sps tmp]#
Thanks Jim !
+2Sorry, I think I forgot to put the require(devtools) command in my earlier post!
Here is a better example in R:
require(devtools)
Loading required package: devtools
install_version("arules", version = "1.5-0", repos = "http://cran.us.r-project.org", dependencies=TRUE)
Downloading package from url: http://cran.us.r-project.org/src/contrib/Archive/arules/arules_1.5-0.tar.gz Installing arules '/opt/vertica/R/bin/R' --no-site-file --no-environ --no-save --no-restore \ --quiet CMD INSTALL '/tmp/RtmpSYqsuv/devtools19f6a1c75a2f4/arules' \ --library='/opt/vertica/R/library' --install-tests * installing *source* package ‘arules’ ... ** package ‘arules’ successfully unpacked and MD5 sums checked ** libs gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c arrayIndex.c -o arrayIndex.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c bitmat.c -o bitmat.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c istree.c -o istree.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c matrix.c -o matrix.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c ptree.c -o ptree.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c rapriori.c -o rapriori.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c reclat.c -o reclat.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c similarity.c -o similarity.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c symtab.c -o symtab.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c tfscan.c -o tfscan.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c tid_count.c -o tid_count.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c tract.c -o tract.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c vecops.c -o vecops.o gcc -std=gnu99 -I/opt/vertica/R/include -DNDEBUG -I/usr/local/include -DNDEBUG -DNIMAPFN -fpic -g -O2 -c warm.c -o warm.o gcc -std=gnu99 -shared -L/opt/vertica/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o arules.so arrayIndex.o bitmat.o istree.o matrix.o ptree.o rapriori.o reclat.o similarity.o symtab.o tfscan.o tid_count.o tract.o vecops.o warm.o -L/opt/vertica/R/lib -lR installing to /opt/vertica/R/library/arules/libs ** R ** data ** inst ** tests ** preparing package for lazy loading Creating a new generic function for ‘abbreviate’ in package ‘arules’ Creating a new generic function for ‘write’ in package ‘arules’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (arules)
packageVersion("arules");
[1] ‘1.5.0’
+2Nice! DEVTOOLS just makes the process easier, but as you found out, you can manually download the version and install it yourself 
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